Publikationen
2022
- Neumann N, Friz S, Forchhammer K. Glucose-1,6-Bisphosphate, a Key Metabolic Regulator, Is Synthesized by a Distinct Family of α-Phosphohexomutases Widely Distributed in Prokaryotes. mBio. Jul 20:e0146922. (2022) doi: 10.1128/mbio.01469-22.
- Bork F, Greve C L, Youn C, Chen S, Wang Y, Nasri M, Focken J, Scheurer J, Engels P, Dubbelaar M, Hipp K, Schittek B, Bugl S, Löffler M W, Skokowa J, Archer N K, Weber A. naRNA is a canonical neutrophil extracellular trap (NET) component and novel inflammation-amplifying composite DAMP. bioRxiv. (2022) doi:10.1101/2022.07.26.499571.
- Yuste R A, Muenkel M, Axarlis K, Gómez Benito M J, Reuss A, Blacker G, Tal M C, Kraicy P, Bastounis E. Borrelia burgdorfei modulates the physical forces and immunity signaling in endothelial cells. iSci. 104793. (2022) doi:10.1016/j.isci.2022.104793.
- Radoš D, Donati S, Lempp M, Rapp J, Link H. Homeostasis of the biosynthetic E. coli metabolome. iScience 25(7). (2022). doi: 10.1016/j.isci.2022.104503.
- Shalev O, Karasov TL, Lundberg DS, Ashkenazy H, Pramoj Na Ayutthaya P, Weigel D. Commensal Pseudomonas strains facilitate protective response against pathogens in the host plant. Nat Ecol Evol. 2022 Feb 24. (2022) doi: 10.1038/s41559-022-01673-7.
- Abramov SM, Straub D, Tejada J, Grimm L, Schädler F, Bulaev A, Thorwarth H, Amils R, Kappler A, Kleindienst S. Biogeochemical Niches of Fe-Cycling Communities Influencing Heavy Metal Transport along the Rio Tinto, Spain. Appl Environ Microbiol. 88(4):e0229021. (2022) doi: 10.1128/AEM.02290-21.
- Borisova M, Balbuchta K, Lovering A, Titz A, Mayer C. NamZ1 and NamZ2 from the oral pathogen Tannerella forsythia are peptidoglycan processing exo-β-N-acetylmuramidases with distinct substrate specificity. J Bacteriol. Feb 7:jb0059721. (2022) doi: 10.1128/jb.00597-21.
- Kuhn Cuellar L, Friedrich A, Gabernet G, de la Garza L, Fillinger S, Seyboldt A, Koch T, Zur Oven-Krockhaus S, Wanke F, Richter S, Thaiss WM, Horger M, Malek N, Harter K, Bitzer M, Nahnsen S. A data management infrastructure for the integration of imaging and omics data in life sciences. BMC Bioinformatics. Feb 7;23(1):61.(2022) doi: 10.1186/s12859-022-04584-3.
- Huang L, Matsuo M, Calderón C, Fan SH, Ammanath AV, Fu X, Li N, Luqman A, Ullrich M, Herrmann F, Maier M, Cheng A, Zhang F, Oesterhelt F, Lämmerhofer M, Götz F. Molecular Basis of Rhodomyrtone Resistance in Staphylococcus aureus. mBio. Feb 15:e0383321. (2022) doi: 10.1128/mbio.03833-21.
- Wegley Kelly L, Nelson CE, Petras D, Koester I, Quinlan ZA, Arts MGI, Nothias LF, Comstock J, White BM, Hopmans EC, van Duyl FC, Carlson CA, Aluwihare LI, Dorrestein PC, Haas AF. Distinguishing the molecular diversity, nutrient content, and energetic potential of exometabolomes produced by macroalgae and reef-building corals. Proc Natl Acad Sci U S A. Feb 1;119(5):e2110283119. (2022) doi: 10.1073/pnas.2110283119.
- Panchiwala H, Shah S, Planatscher H, Zakharchuk M, König M, Dräger A. The systems biology simulation core library, Bioinformatics 38(3):864–865. (2022) doi: 10.1093/bioinformatics/btab669.
- Geißert JK, Bohn E, Mostolizadeh R, Dräger A, Autenrieth IB, Beier S, Deusch O, Renz A, Eichner M, Schütz MS. A Computational Model of Bacterial Population Dynamics in Gastrointestinal Yersinia enterocolitica Infections in Mice. Biology 11:297. (2022) doi: 10.3390/ biology11020297.
- Krakau S, Straub D, Gourlé H, Gabernet G, Nahnsen S. nf-core/mag: a best-practice pipeline for metagenome hybrid assembly and binning, NAR Genomics and Bioinformatics 4(1):lqac007. (2022) doi: 10.1093/nargab/lqac007.
- Tacconelli E, Göpel S, Gladstone BP, Eisenbeis S, Hölzl F, Buhl M, Górska A, Cattaneo C, Mischnik A, Rieg S, Rohde AM, Kohlmorgen B, Falgenhauer J, Trauth J, Käding N, Kramme E, Biehl LM, Walker SV, Peter S, Gastmeier P, Chakraborty T, Vehreschild MJ, Seifert H, Rupp J, Kern WV; DZIF BLOOMY study group. Development and validation of BLOOMY prediction scores for 14-day and 6-month mortality in hospitalised adults with bloodstream infections: a multicentre, prospective, cohort study. Lancet Infect Dis. Jan 19:S1473-3099(21)00587-9. (2022) doi: 10.1016/S1473-3099(21)00587-9.
- Slavetinsky CJ, Hauser JN, Gekeler C, Slavetinsky J, Geyer A, Kraus A, Heilingbrunner D, Wagner S, Tesar M, Krismer B, Kuhn S, Ernst CM, Peschel A. Sensitizing Staphylococcus aureus to antibacterial agents by decoding and blocking the lipid flippase MprF. eLife 11:e66376. (2022) doi: 10.7554/eLife.66376.
- Forchhammer K, Selim KA, Huergo LF. New views on PII signaling: from nitrogen sensing to global metabolic control. Trends Microbiol. (2022) doi: 10.1016/j.tim.2021.12.014.
- Engelbrecht A, Wolf F, Esch A, Kulik A, Kozhushkov SI, de Meijere A, Hughes CC, Kaysser L. Discovery of a Cryptic Nitro Intermediate in the Biosynthesis of the 3-(trans-2'-Aminocyclopropyl)alanine Moiety of Belactosin A. Org Lett. 24(2):736-740. (2022) doi: 10.1021/acs.orglett.1c04205.
- Lueder U, Jørgensen BB, Maisch M, Schmidt C, Kappler A. Influence of Fe(III) source, light quality, photon flux and presence of oxygen on photoreduction of Fe(III)-organic complexes - Implications for light-influenced coastal freshwater and marine sediments. Sci Total Environ. 814:152767. (2022) doi: 10.1016/j.scitotenv.2021.152767.
- Malik IT, Hegemann JD, Brötz-Oesterhelt H. Generation of Lasso Peptide-Based ClpP Binders. International Journal of Molecular Sciences. 23(1):465. (2022) doi: https://doi.org/10.3390/ijms23010465.