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Visualizing Complex Processes: The Biosynthesis of Vancomycin

Researchers from the Ziemert and Stegman Labs animate biosynthesis of the glycopeptide antibiotic (GPA) vancomycin.

29.11.2024 CMFI News

Modern natural product research is a highly interdisciplinary field. In this field, researchers with different scientific backgrounds work together to investigate the properties of a natural substance. Among other things, the aim is to understand the mode of action of chemical compounds, decipher evolutionary processes and carry out the biochemical characterisation of the enzymes involved. An important key element in the research of a natural substance is to understand its development process, the biosynthesis pathway.

Those involved usually come from fields such as microbiology, synthetic chemistry, biochemistry or bioinformatics. Collaboration can be a challenge, as the language of the researchers sometimes differs between disciplines.

In a CMFI project on scientific visualisation, researchers from the Ziemert Lab and the Stegman Lab, together with the Centre for Media Competence of the University of Tübingen, have produced a video that animates the biosynthesis of the glycopeptide antibiotic (GPA) vancomycin.

Audiovisual formats can be used to visualize complex processes. Animations are increasingly being used in interdisciplinary communication to create a basis for discussion and bring together different perspectives from research. The video is intended to show how audiovisual formats can improve the understanding of complex processes.

The video is accompanied by an article published in Current Opinion in Microbiology:

Gavriilidou A, Adamek M; Rodler J-P, Kubach N, Voigtländer A, Kokkoliadis L, Hughes CC, Cryle MJ, Stegmann E, Ziemert N. (2024) Animating insights into the biosynthesis of glycopeptide antibiotics. Curr Opin Microbiol. 82:102561. doi: j.mib.2024.102561.

Scientific Contact

Prof. Dr. Nadine Ziemert
University of Tübingen
Interfaculty Institute of Microbiology and Infection Medicine Tübingen
Translational Genome Mining for Natural Products

nadine.ziemert@uni-tuebingen.de
Webseite

 

PD Dr. Efthimia Stegmann
University of Tübingen
Interfaculty Institute of Microbiology and Infection Medicine
Microbiology/Biotechnology

evi.stegmann@uni-tuebingen.de
Webseite

Press Contact

Leon Kokkoliadis
Public Relations

Tel: +49 7071 29-74707 / +49 152 346 79 269
E-Mail: leon.kokkoliadis@uni-tuebingen.de