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Publications

2023

  • Tchoupa AK, Kretschmer D, Schittek B, Peschel A. The epidermal lipid barrier in microbiome-skin interaction. Trends Microbiol. S0966–842X(23)00027-6. (2023) doi: 10.1016/j.tim.2023.01.009.
     
  • Burkhardt M, Rapp J, Menzel C, Link H, Forchhammer K. The Global Influence of Sodium on Cyanobacteria in Resuscitation from Nitrogen Starvation. Biology (Basel) 12(2):159. (2023) doi: 10.3390/biology12020159.
     
  • Hafza N, Li N, Luqman A, Götz F. Identification of a serotonin N-acetyltransferase from Staphylococcus pseudintermedius ED99. Front Microbiol. 14:1073539. (2023) doi: 10.3389/fmicb.2023.1073539.
     
  • Leonidou N, Renz A, Mostolizadeh R and Dräger A. New Workflow Predicts Drug Tar-gets Against SARS-CoV-2 via Metabolic Changes in Infected Cells. PLoS Comput Biol 19(3):
    e1010903. (2023) doi: 10.1371/journal.pcbi.1010903.
  • Salzer A, Wolz C. Role of (p)ppGpp in antibiotic resistance, tolerance, persistence and survival in Firmicutes. microLife 4, uqad009. (2023) doi: 10.1093/femsml/uqad009.

  • Eggers O, Renschler FA, Michalek LA, Wackler N, Walter E, Smollich F, Klein K, Sonnabend MS, Egle V, Angelov A, Engesser C, Borisova M, Mayer C, Schütz M, Bohn E. YgfB increases β-lactam resistance in Pseudomonas aeruginosa by counteracting AlpA-mediated ampDh3 expression. Commun Biol 6, 254. (2023) doi: 10.1038/s42003-023-04609-4.

  • Stein-Thoeringer  C, Saini NY, Zamir E, et al. A non-antibiotic-disrupted gut microbiome is associated with clinical responses to CD19-CAR-T cell cancer immunotherapy. Nat Med. (2023) doi: 10.1038/s41591-023-02234-6.

  • Pendergraft MA, Belda-Ferre P, Petras D, Morris CK, Mitts BA, Aron AT, Bryant M, Schwartz T, Ackermann G, Humphrey G, Kaandorp E, Dorrestein PC, Knight R, Prather KA. Bacterial and Chemical Evidence of Coastal Water Pollution from the Tijuana River in Sea Spray Aerosol. Environ Sci Technol. Mar 2. (2023) doi: 10.1021/acs.est.2c02312. Epub ahead of print. PMID: 36862087.

  • Gautam A, Zeng W, Huson DH. MeganServer: facilitating interactive access to metagenomic data on server. Bioinformatics 39(3). (2023) doi: 10.1093/bioinformatics/btad105.

  • Segrè D, Mitri S, Shou W, Süel GM, Mizrahi I, Kelly L, Rebolleda-Gómez M, Ratzke C, Ogbunugafor CB, Schwartzman JA, Kryazhimskiy S, Leventhal GE, Kost C, Bell T. What do you most want to understand about how collective features emerge in microbial communities? Cell Syst. 14(2): 91–97. (2023) doi: 10.1016/j.cels.2023.01.001.

  • Selim KA, Haffner M, Mantovani O, Hartmann MD. Carbon signaling protein SbtB possesses atypical redox-regulated apyrase activity to facilitate regulation of bicarbonate transporter SbtA. Proc. Natl. Acad. Sci. 120(8): e2205882120. (2023) doi: 10.1073/pnas.2205882120.

  • Dahal S, Renz A, Dräger A, Yang L. Genome-scale model of Pseudomonas aeruginosa metabolism unveils virulence and drug potentiation. Commun. Biol. 6, 165. (2023) doi: 10.1038/s42003-023-04540-8.

  • Glöckler M, Dräger A, Mostolizadeh R. Hierarchical modelling of microbial communities. Bioinformatics 39(1). (2023) doi: 10.1093/bioinformatics/btad040.

  • Farke N, Schramm T, Verhülsdonk A, Rapp J, Link H. Systematic analysis of in-source modifications of primary metabolites during flow-injection time-of-flight mass spectrometry. Anal. Biochem.  664: 115036. (2023) doi: 10.1016/j.ab.2023.115036.

  • Constantinou I, Bastounis EE. Cell-stretching devices: advances and challenges in biomedical research and live-cell imaging. Trends Biotechnol. S0167–7799(22)00332-8. (2023) doi: 10.1016/j.tibtech.2022.12.009.

  • Clasen SJ, Bell MEW, Borbón A, Lee D, Henseler ZM, De La Cuesta-Zuluaga J, Parys K, Zou J, Wang Y, Altmannova V, Youngblut ND, Weir JR, Gewirtz AT, Belkhadir Y, Ley RE. Silent recognition of flagellins from human gut commensal bacteria by Toll-like receptor 5. Sci. Immunol. 8(79). (2023) doi: 10.1126/sciimmunol.abq7001.

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